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JProfileGrid v2.0.5 software 
JProfileGrid v2.0.5 source code 
New features include speed enhancements, overviews, second ProfileGrid window pane, meta data searching, grep filtering, and more.
Documentation is pending.
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Running JProfileGrid
To launch the graphical user interface under MacOS or Windows,
double-click on the "JProfileGrid.jar" file icon.
Alternatively, for very large alignments (10,000+ of sequences
of average length 500 residues) use a command such as the following in a
terminal to give Java more memory:
% java -Xmx1024M -jar JProfileGrid2.jar
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